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2017, Número 2

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TIP Rev Esp Cienc Quim Biol 2017; 20 (2)


Red de coexpresión de 320 genes de Tectona grandis relacionados con procesos de estrés abiótico y xilogénesis

Camel V, Galeano E, Carrer H
Texto completo Cómo citar este artículo Artículos similares

Idioma: Español
Referencias bibliográficas: 47
Paginas: 5-14
Archivo PDF: 553.68 Kb.


PALABRAS CLAVE

biología de sistemas, enriquecimiento funcional, genes diferencialmente expresados, minería de literatura, ontología génica.

RESUMEN

Tectona grandis es un árbol maderable de importancia económica en bosques tropicales y subtropicales. Mediante este estudio, se identificaron familias de factores de transcripción (FTs) y genes codificantes para enzima, diferencialmente expresados en el xilema del tallo, implicados en la regulación de la respuesta a estrés abiótico y xilogénesis en T. grandis. Así, fue analizada la distribución evolutiva de 19 genes codificantes para FTs T. grandis mediante análisis filogenéticos. También, fue utilizada la minería de bases de datos y publicaciones para identificar 320 genes de Arabidopsis thaliana (ortólogos a T. grandis) como soporte experimental y predictivo. Como resultados, se encontraron FTs de las familias bZIP, MYB, NAC, ER, bHLH, NuY y genes que codifican enzimas. Así mismo, se logró analizar el interactoma de T. grandis encontrando correlaciones de Pearson significativas para genes que regulan vías metabólicas de fenilpropanoides y estrés abiótico. Además, la red de coexpresión reveló nodos y aristas entre los genes TgRAP1, TgMyB1, TgHSF1, TgMyB3, TgNAC1, TgTsiid1, TgLieTFs1, TgNuy3, TgRAP2 y TgNuy4. En particular, los análisis de ontología génica mostraron 31 genes de respuesta a estrés abiótico, principalmente TgHShT1, TgHSF1 y TgHSF2 como correguladores. Además, se encontró que el regulador maestro TgNAC1, está involucrado en la corregulación de otros factores de transcripción.


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