medigraphic.com
Instituto Nacional de Salud Pública

2018, Número 1

<< Anterior Siguiente >>

salud publica mex 2018; 60 (1)


Klebsiella variicola y Klebsiella quasipneumoniae con capacidad para adaptarse al ambiente clínico y a las plantas

Martínez-Romero E, Rodríguez-Medina N, Beltrán-Rojel M, Toribio-Jiménez J, Garza-Ramos U

Idioma: Ingles.
Referencias bibliográficas: 41
Paginas: 29-40
Archivo PDF: 529.09 Kb.


RESUMEN

Objetivo. Comparar genes de colonización de plantas o de virulencia en los genomas reportados de K. variicola, K. quasipneumoniae y K. pneumoniae. Material y métodos. Se utilizaron análisis in silico y de Jaccard. Por PCR se detectaron genes de fimbrias. Se realizaron ensayos biológicos con aislados de plantas y clínicos. Resultados. Los genes de colonización de plantas como celulasas, catalasas y hemaglutininas se encontraron principalmente en genomas de K. variicola. Las β-lactamasas cromosómicas son características de la especie y en algunos casos estaban mal clasificadas. K. variicola y K. pneumoniae producen hormonas vegetales. Conclusiones. Se encontró una distribución en mosaico de los genes de asociación con plantas y de virulencia en K. variicola y K. quasipneumoniae. Principalmente en K. variicola se encontraron algunos genes involucrados en la colonización de plantas. Se propone el término plantanosis para las infecciones humanas de origen vegetal.


REFERENCIAS (EN ESTE ARTÍCULO)

  1. Brisse S, Passet V, Grimont PA. Description of Klebsiella quasipneumoniae sp. nov., isolated from human infections, with two subspecies, Klebsiella quasipneumoniae subsp. quasipneumoniae subsp. nov. and Klebsiella quasipneumoniae subsp. similipneumoniae subsp. nov., and demonstration that Klebsiella singaporensis is a junior heterotypic synonym of Klebsiella variicola. Int J Syst Evol Microbiol 2014;64(9):3146-3152. https://doi. org/10.1099/ijs.0.062737-0

  2. Martinez-Romero E, Silva-Sanchez J, Barrios H, Rodriguez-Medina N, Martinez-Barnetche J, Tellez-Sosa J, et al. Draft genome sequences of Klebsiella variicola plant isolates. Genome Announc 2015;3(5):e01015-15. https://doi.org/10.1128/genomeA.01015-15

  3. Rosenblueth M, Martinez L, Silva J, Martinez-Romero E. Klebsiella variicola, a novel species with clinical and plant-associated isolates. System Appl Microbiol 2004;27(1):27-35. https://doi.org/10.1078/0723-2020-00261

  4. Pinto-Tomas AA, Anderson MA, Suen G, Stevenson DM, Chu FS, Cleland WW, et al. Symbiotic nitrogen fixation in the fungus gardens of leaf-cutter ants. Science 2009;326(5956):1120-1123.

  5. Medrano EG, Forray MM, Bell AA. Complete genome sequence of a Klebsiella pneumoniae strain isolated from a known cotton insect boll vector. Genome Announc 2014;2(4):e00850-14. https://doi.org/10.1128/ genomeA.00850-14

  6. Garza-Ramos U, Martinez-Romero E, Silva-Sanchez J. SHV-type extended-spectrum beta-lactamase (ESBL) are encoded in related plasmids from enterobacteria clinical isolates from Mexico. Salud Publica Mex 2007;49(6):415-421. https://doi.org/10.1590/S0036-36342007000600008

  7. Garza-Ramos U, Moreno-Dominguez S, Hernandez-Castro R, Silva- Sanchez J, Barrios H, Reyna-Flores F, et al. Identification and characterization of imipenem-resistant Klebsiella pneumoniae and susceptible Klebsiella variicola isolates obtained from the same patient. Microb Drug Resist 2016;22(3):179-184. https://doi.org/10.1089/mdr.2015.0181

  8. Garza-Ramos U, Silva-Sanchez J, Martinez-Romero E, Tinoco P, Pina- Gonzales M, Barrios H, et al. Development of a multiplex-PCR probe system for the proper identification of Klebsiella variicola. BMC Microbiol 2015;15:64. https://doi.org/10.1186/s12866-015-0396-6

  9. Maatallah M, Vading M, Kabir MH, Bakhrouf A, Kalin M, Naucler P, et al. Klebsiella variicola is a frequent cause of bloodstream infection in the stockholm area, and associated with higher mortality compared to K. pneumoniae. PloS One 2014;9(11):e113539. https://doi.org/10.1371/journal. pone.0113539

  10. Seki M, Gotoh K, Nakamura S, Akeda Y, Yoshii T, Miyaguchi S, et al. Fatal sepsis caused by an unusual Klebsiella species that was misidentified by an automated identification system. J Med Microbiol 2013;62(5):801-803. https://doi.org/10.1099/jmm.0.051334-0

  11. Brisse S, Duijkeren E. Identification and antimicrobial susceptibility of 100 Klebsiella animal clinical isolates. Vet Microbiol 2005;25:105(3- 4):307-312.

  12. Podder MP, Rogers L, Daley PK, Keefe GP, Whitney HG, Tahlan K. Klebsiella species associated with bovine mastitis in Newfoundland. PloS One 2014;9(9):e106518. https://doi.org/10.1371/journal.pone.0106518

  13. Holt KE, Wertheim H, Zadoks RN, Baker S, Whitehouse CA, Dance D, et al. Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health. Proc Natl Acad Sci USA 2015;112(27):E3574-E3581. https://doi. org/10.1073/pnas.1501049112

  14. Andrade BG, de Veiga Ramos N, Marin MF, Fonseca EL, Vicente AC. The genome of a clinical Klebsiella variicola strain reveals virulence-associated traits and a pl9-like plasmid. FEMS Microbiol Lett 2014;360(1):13-16. https://doi.org/10.1111/1574-6968.12583

  15. Garza-Ramos U, Silva-Sanchez J, Barrios H, Rodriguez-Medina N, Martinez-Barnetche J, Andrade V. Draft genome sequence of the first hypermucoviscous Klebsiella variicola clinical isolate. Genome Announc 2015;3(2):e01352-14. https://doi.org/10.1128/genomeA.01352-14

  16. Chen M, Li Y, Li S, Tang L, Zheng J, An Q. Genomic identification of nitrogen-fixing Klebsiella variicola, K. pneumoniae and K. quasipneumoniae. J Basic Microbiol 2016;56(1):78-84 https://doi.org/10.1002/jobm.201500415

  17. Martínez-Romero E, Rodríguez-Medina N, Beltrán-Rojel M, Pérez- Rueda E, Garza-Ramos U. Genome misclassification of Klebsiella variicola and Klebsiella quasipneumoniae isolated from plants, animals and humans. Salud Publica Mex. 2018;60. https://doi.org/10.21149/8149

  18. Fouts DE, Tyler HL, DeBoy RT, Daugherty S, Ren Q, Badger JH, et al. Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice. PLoS Genetics 2008;4(7):e1000141. https://doi.org/10.1371/journal. pgen.1000141

  19. Lin L, Wei C, Chen M, Wang H, Li Y, Li Y, et al. Complete genome sequence of endophytic nitrogen-fixing Klebsiella variicola strain DX120E. Stand Genomic Sci 2015;10:22. https://doi.org/10.1186/s40793-015-0004-2

  20. Garcia-Vallve S, Palau J, Romeu A. Horizontal gene transfer in glycosyl hydrolases inferred from codon usage in Escherichia coli and Bacillus subtilis. Mol Biol Evol 1999;16(9):1125-1134. https://doi.org/10.1093/oxfordjournals. molbev.a026203

  21. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Bol Evol 2011;28(10):2731-2739. https://doi.org/10.1093/molbev/msr121

  22. Khalid A, Tahir S, Arshad M, Ahmad Z. Relative efficiency of rhizobacteria for auxin biosynthesis in rhizosphere and non-rhizosphere soils. Aust J Soil Res 2004;42(8):921-926. https://doi.org/10.1071/SR04019

  23. Mehta S, Nautiyal CS. An efficient method for qualitative screening of phosphate-solubilizing bacteria. Curr Microbiol 2001;43(1):51-56. https:// doi.org/10.1007/s002840010259

  24. Schwyn B, Neilands JB. Universal chemical assay for the detection and determination of siderophores. Anal Biochem 1987;160(1):47-56. https:// doi.org/10.1016/0003-2697(87)90612-9

  25. Malleswari D, Bagyanarayana G. Plant growth-promoting activities and molecular characterization of rhizobacterial strains isolated from medicinal and aromatic plants. IOSR-JPBS 2013;6(6):30-37. https://doi. org/10.9790/3008-0663037

  26. Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J. Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli. J Bacteriol 1999;181(24):7479-7484.

  27. Hazen TH, Zhao L, Sahl JW, Robinson G, Harris AD, Rasko DA, et al. Characterization of Klebsiella sp. strain 10982, a colonizer of humans that contains novel antibiotic resistance alleles and exhibits genetic similarities to plant and clinical Klebsiella isolates. Antimicrob Agents Chemother 2014;58(4):1879-1888. https://doi.org/10.1128/AAC.01605-13

  28. Lu MG, Jiang J, Liu L, Ma AP, Leung FC. Complete genome sequence of Klebsiella variicola Strain HKUOPLA, a cellulose-degrading bacterium isolated from giant panda feces. Genome Announc 2015;3(5):e01200-15. https://doi.org/10.1128/genomeA.01200-15

  29. Lu MG, Jiang J, Liu L, Ma AP, Leung FC. Complete genome sequence of Klebsiella pneumoniae strain HKUOPLC, a cellulose-degrading bacterium isolated from giant panda feces. Genome Announc 2015;12;3(6):e01318- 15. https://doi.org/10.1128/genomeA.01318-15

  30. Passet V, Brisse S. Association of tellurite resistance with hypervirulent clonal groups of Klebsiella pneumoniae. J Clin Microbiol 2015;53(4):1380- 1382: 1380-1382. https://doi.org/10.1128/JCM.03053-14

  31. Ponnusamy D, Clinkenbeard KD. Role of tellurite resistance operon in filamentous growth of Yersinia pestis in macrophages. PloS One 2015;10(11):e0141984. https://doi.org/10.1371/journal.pone.0141984

  32. Woodward AW, Bartel B. Auxin: regulation, action, and interaction. Ann Bot 2005;95(5):707-735. https://doi.org/10.1093/aob/mci083

  33. Ryu RJ, Patten CL. Aromatic amino acid-dependent expression of indole-3-pyruvate decarboxylase is regulated by TyrR in Enterobacter cloacae UW5. J Bacteriol 2008;190(21):7200-7208. https://doi.org/10.1128/ JB.00804-08

  34. Cassan F, Bottini R, Schneider G, Piccoli P. Azospirillum brasilense and Azospirillum lipoferum hydrolyze conjugates of GA20 and metabolize the resultant aglycones to GA1 in seedlings of rice dwarf mutants. Plant Physiol 2001;125(4):2053-2058. https://doi.org/10.1104/pp.125.4.2053

  35. Yamaguchi S. Gibberellin metabolism and its regulation. Annu Rev Plant Biol 2008;59:225-251. https://doi.org/10.1146/annurev.arplant. 59.032607.092804

  36. Naik PR, Raman G, Narayanan KB, Sakthivel N. Assessment of genetic and functional diversity of phosphate solubilizing fluorescent pseudomonads isolated from rhizospheric soil. BMC Microbiol 2008;8:230. https:// doi.org/10.1186/1471-2180-8-230

  37. Ahmed E, Holmstrom SJ. Siderophores in environmental research: roles and applications. Microbial Biotechnol 2014;7(3):196-208. https://doi. org/10.1111/1751-7915.12117

  38. D’Onofrio A, Crawford JM, Stewart EJ, Witt K, Gavrish E, Epstein S, et al. Siderophores from neighboring organisms promote the growth of uncultured bacteria. Chemistry & Biology 2010;17(3):254-264. https://doi. org/10.1016/j.chembiol.2010.02.010

  39. Zurfluh K, Poirel L, Nordmann P, Klumpp J, Stephan R. First detection of Klebsiella variicola producing OXA-181 carbapenemase in fresh vegetable imported from Asia to Switzerland. Antimicrob Resist Infect Control 2015;4:38. https://doi.org/10.1186/s13756-015-0080-5

  40. McNally A, Thomson NR, Reuter S, Wren BW. ‘Add, stir and reduce’: Yersinia spp. as model bacteria for pathogen evolution. Nature Rev Micro- Biol 2016;14(3):177-190. https://doi.org/10.1038/nrmicro.2015.29

  41. Martinez J, Martinez L, Rosenblueth M, Silva J, Martinez-Romero E. How are gene sequence analyses modifying bacterial taxonomy? The case of Klebsiella. Int Microbiol 2004;7(4):261-268.




2020     |     www.medigraphic.com